enzyme and protein biochemistry terms

What this neuron does

This neuron responds to scientific words about proteins and enzymes, especially "active site" and phosphorylation. Turning it up made the model drift into counting or repeated lists, which does not clearly match the topic.

Written by Claude from this neuron's activations and steering outputs. Confidence: medium. Think it is wrong? Flag it (opens a prefilled issue on GitHub).

Fires most on

The text windows where this neuron's activation was highest. Amber marks positive activation; the outlined token is the peak. Hover a token for its strength.

1. #1 peak

   fry an egg, clear white ‘liquid’ changes to solid white. This is an example of denaturation.⏎- The key with an enzyme is its active site. Its active site has a shape that is complementary with

2. #2 peak

   , which is why the bonding and interactions between the R groups of the amino acids must be correct. If the interactions are wrong, then the shape of the active site will be wrong, and so the enzyme won’t be able to bind its substrate

3. #3 peak

   We will also develop tools for accurately measuring the location and orientation of single fluorescent probes, which will then allow us to explore the relationships between the chemistry at the active site and the dynamics of the lever arms of myosin. All of these new

4. #4 peak

   SUMO or NEDD8). Finally, ubiquitin can also be acetylated on Lys, or phosphorylated on Ser, Thr, or Tyr residues, and each modification can dramatically alter the signaling outcome.⏎The impact of ubiqu

5. #5 peak

   p53 signaling pathway. B. In response to intrastrand crosslinks (crosslink), ATR and its interacting partner ATRIP become activated and phosphorylated leading to the induction of several downstream pathways. Rabbit Polyclonal to APOL

6. #6 peak

   - Search for consensus intron/exon sequences:⏎Analysis of a large number of mRNA genes has led to the identification of highly conserved consensus sequences⏎at the 5' and 3' ends of essentially all mRNA intr

Steering

Push this neuron up or down while the model writes, and watch what changes. The outputs were generated ahead of time, so nothing runs in your browser.

Most negative on

Where the activation went furthest below zero. Blue marks negative activation. Many neurons mean something different in each direction.

1. #1 peak

   development and wound healing. Hepatocyte growth factor (HGF) is the only known ligand of the MET receptor. MET is normally expressed by cells of epithelial origin, while expression of HGF is restricted to

2. #2 peak

   without histones? Previous studies had shown that Thermoplasma gained a bacterial protein via horizontal gene transfer – the movement of genetic material between unicellular or multicellular organisms other than through reproduction. Research by Antoine Hocher in the Molecular Systems lab

3. #3 peak

   , we describe a protocol that employs sample derived rRNA capture probes to remove rRNA from a metagenomic total RNA sample. To begin, both mosquito and microbial small and large subunit rRNA fragments are amplified from a metagenomic community

4. #4 peak

   discussing with⏎students that methods exist to take the analysis to a higher<|endoftext|>Cells Reference Libraries⏎Paneth Cells are one of four principal cell types found in the epithelium of the small intestine; the other three are the goblet cell,

Which neurons in earlier layers feed this one, and which later ones it feeds. Amber links excite, blue links suppress; longer bars are stronger.

Activation histogram

How often this neuron fires at each strength. Almost always it does close to nothing (the tall bars in the middle); the snippets above are the rare moments it fired hard, amber for positive and blue for negative.

Logit lens

The words this neuron nudges the model toward (amber) or away from (blue) when it fires. A hint, not a label: many neurons work through later layers instead.